Microbiome Insights Sample Report:

Shallow Shotgun Metagenome Sequencing

Each shallow shotgun sequencing project will include the following deliverables as standard:

• Sequencing QC information
• Trimmed, host DNA-depleted, adaptor-removed FASTQ data
• Relative abundance tables of taxa generated via mapping to a curated reference database; species and genus assignments where available
• Functional profiles, reported as KEGG orthology groups, modules, and pathways where available, or SEED Subsystems

In addition we can also assist with more advanced analyses, including: 

• Microbiome analysis summarizing: (i) alpha diversity (Shannon Diversity Index) and (ii) the most abundant taxonomic groups in each specimen.
• Beta-diversity analysis (unsupervised ordinations and PERMANOVA) of taxonomic and functional profiles based on study variables of interest
• Differential abundance analysis of functional and taxonomic features based on study variables of interest

Your data is stored on Microbiome Insights’ own servers (on-site in British Columbia, Canada) and securely transferred to you via our Nextcloud platform. Reports are delivered as html files.

Complete the form to download copies of our shallow shotgun sequencing reports.